CDS

Accession Number TCMCG016C00987
gbkey CDS
Protein Id OMP08590.1
Location complement(join(<1870..2146,2371..2552,2842..3093,4258..4314,4717..4788,4877..4978,5147..5221,5431..5687,6200..6236))
Organism Corchorus capsularis
locus_tag CCACVL1_01104

Protein

Length 437aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01003675.1
Definition Histone deacetylase superfamily, partial [Corchorus capsularis]
Locus_tag CCACVL1_01104

EGGNOG-MAPPER Annotation

COG_category B
Description histone deacetylase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016811        [VIEW IN EMBL-EBI]
GO:0019213        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019902        [VIEW IN EMBL-EBI]
GO:0019903        [VIEW IN EMBL-EBI]
GO:0033558        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042903        [VIEW IN EMBL-EBI]
GO:0043014        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048487        [VIEW IN EMBL-EBI]
GO:0051721        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090042        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCTTCAAACCTTCCGCCATCCATCTTTTGCAGGAAATGTGATGTTTTTGGTTCGAAATAATGTGGTAAAGTGGAAGAGTCATAGAAGATTTAGTCTAAATACAGCGCTTTTGGGGCGTGGGTGTTTTTGTAAGCCTTCAATAGCAAGGAAAAAAGCCTACTCAAAAGGCATCAAAACTTCAGTTTCTTGTTCATATAGCACAGAGGAGAGTAATAGTTTGCCATCCTTAAAACAGCTGAGTGATGCGAGAGTGATTTACGCTGTTGCTCCAGCCCTGGGTCATAACAAGGAGGCACATCCAGAATGCAGTGCTAGAGTTCCTTCAATTGTGACTGCTCTTGAAAAGATGGAGCTAACCTCAAAGTTTCGTGGCTCAGACATCCTTGAACTTCAAAATTTCAAGCTTGCTTCAGTTGATGACATTGCAAGTGTTCACGCAACAGCTTATGTATCAGGCCTTGAGAAGGCTATGGATCGGGCCTCTGAGCAGGGCCTTATTGTAATTGAGGGCTCTGGACCAACATATGCTACTCCCACAACATTTCGTGAGTCACTAGTTGCAGCTGGAGCAGGACTTGCCTTAGTTGATTCAGTGGTTGCAGCATCAAAGAACAGATTAGATCCTCCTATGGGTTTTGCTCTGATAAGACCTCCAGGGCACCATGCCATTCCAAAAGGTCCCATGGGGTTCTGTGTTTTTGGAAATGTGGCTATTGCAGCTCGTCATGCTCAGCGTGTACATGGATTAAAAAAAGTGTTTATTATTGATTTTGATGTTCACCATGGGAATGGAACAAATGATGCCTTCTTGGACGATCCAGATATATTTTTTCTTTCAACCCATCAAGATGGAAGCTACCCTGGCACTGGAAGAATTGATGAGATAGGTCATGGGGCTGGTGAAGGAGCAACACTTAATCTACCTTTACCTGGAGGCTCAGGTGACATTGCCATGAGAACTGTTTTTGATGAAGTCATTGTGCCCTGTGCTCAAAGGTTCAAGCCAGATATAATCCTTGTCTCTGCAGGGTATGATGGTCACGTATTGGATCCACTAGCTAGTCTCCAGTTTACAACAGGGACATACTACATGCTTGCGTCTAGTATCAAACAACTTGCTAAAGATTTATGTGGTGGCCGGTGTGTATTTTTCCTGGAAGGAGGATACAACCTCGATTCACTTTCATATTCCGTGGCAGACTCATTTCGTGCATTTCTTGGGGAGCCAAGTTTGGCACCTGAGTTTGATAACCCTGCCATATTATATGAAGAGCCATCAACCAGGGTGAAGAAAGCGATTCAGAGG
Protein:  
MELQTFRHPSFAGNVMFLVRNNVVKWKSHRRFSLNTALLGRGCFCKPSIARKKAYSKGIKTSVSCSYSTEESNSLPSLKQLSDARVIYAVAPALGHNKEAHPECSARVPSIVTALEKMELTSKFRGSDILELQNFKLASVDDIASVHATAYVSGLEKAMDRASEQGLIVIEGSGPTYATPTTFRESLVAAGAGLALVDSVVAASKNRLDPPMGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQRVHGLKKVFIIDFDVHHGNGTNDAFLDDPDIFFLSTHQDGSYPGTGRIDEIGHGAGEGATLNLPLPGGSGDIAMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLASLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLDSLSYSVADSFRAFLGEPSLAPEFDNPAILYEEPSTRVKKAIQR